Section: User Commands (1) Updated: Mon, 01 Aug 2005 15:28:08 -0300 Local index
seqsplit - split seqs into chunks of defined size and overlap
This manual page documents briefly the
seqsplit is a program that splits sequences into smaller chunks of defined size and overlap; output a FASTA file.
Help; display usage and version.
Output the new FASTA file to <file>.
Save one-line-per-frag coord summary file to <f>.
Specify sequence file format <s>.
Set max length of each unique seq frag to <n>.
Set overlap length to <n> (total frag size = length+overlap).
Use short "frag1" names, not "<src>/<from>-<to>".
Still working in 32 bits -- no sequence can be more than 2 GB in size.
HHMI/Department of Genetics
Washington University School of Medicine
4444 Forest Park Blvd., Box 8510
St Louis, MO 63108 USA
FAX : 1-314-362-2157
This manual page was written by Nelson A. de Oliveira < firstname.lastname@example.org>,
for the Debian project (but may be used by others).
This document was created by
using the manual pages.
Time: 21:25:47 GMT, April 16, 2011